Source-Free Graph Foundation Model Adaptation via Pseudo-Source Reconstruction

Abstract

Aiming to overcome distribution shift and label sparsity that hinder cross-domain generalization of Graph Neural Networks (GNNs), Unsupervised Graph Domain Adaptation (UGDA) transfers knowledge from a label-rich source to an unlabeled target graph. Yet in practice, strict privacy protocols often withhold the source graph, reducing UGDA to the more constrained Source-Free UGDA (SFUGDA) where only a pre-trained source GNN remains. In this setting, the source GNN serves as a simple, task-specific graph foundation model. Despite recent progress, existing source-free UGDA methods remain hampered by source-knowledge absence: deprived of source graphs, they lose the reference distribution needed to gauge domain shift and must lean on noisy target cues, incurring biased adaptation and catastrophic forgetting. To overcome this drawback, this paper devises Source-Free Graph foundation model Adaptation via pseudo-source Reconstruction (SFGAR), a two-stage SFUGDA framework that first generates pseudo-source graphs to recover the source distribution encoded in a frozen pre-trained GNN, then adversarially aligns these synthetic graphs with the unlabeled target. Theoretical analysis shows that this proxy alignment tightly bounds the target-domain generalization error. Extensive experiments on public benchmarks validate the state-of-the-art performance of SFGAR.